Project Description:
In this project, we aim to integrate our understanding of protein folding using quantum principles. Protein folding has been a long-standing problem with various real-life applications that can be significantly improved with a better understanding of the protein folding dynamics. We will explore how quantum computers can enhance protein folding sequences to gain a more in-depth insight into the process. Additionally, we will expand the main chain by including more amino acids or neuropeptides and lengthen the side chains to include sub-sidechains. However, this will require additional penalty terms to ensure proper constraints. To customize the interaction model according to your specific needs, you can incorporate custom interaction model, such as the mj-interaction model. It is advisable to add more penalty parameters to enforce the correct chirality for better results. You have the flexibility to modify the code to fit your individual requirements, leading to the best solution for simulating protein chains and peptide interactions.